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Survival-associated eQTLs across different cancer types


We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "STAD"
e.g., "rs1824937"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
THCA rs8118634 chr20:16645846 T/C 2.21E-6 471 16.23 16.37 11.9 KM Plot
THCA rs8118638 chr20:16645880 T/C 2.21E-6 472 16.23 16.02 11.9 KM Plot
THCA rs8131733 chr21:45587031 A/G 0.000248 486 17.75 16.2 15.7 KM Plot
THCA rs8135865 chr22:19549170 T/C 2.07E-6 484 15.97 15 11.05 KM Plot
THCA rs8136102 chr22:26429185 A/G 1.63E-6 479 16.13 15.17 12.95 KM Plot
THCA rs8136437 chr22:25464549 G/A 7.83E-10 467 15.83 16.33 7.35 KM Plot
THCA rs8142242 chr22:26428821 G/A 1.96E-6 480 16.07 15.17 12.95 KM Plot
THCA rs8192004 chr4:140586701 A/C 4.58E-6 490 11.72 14.68 16.38 KM Plot
THCA rs819845 chr3:155667855 C/A 0.000216 485 9 14.63 16.37 KM Plot
THCA rs819857 chr3:155688355 C/T 5.41E-5 487 11.9 14.93 16.37 KM Plot
THCA rs82332 chr4:3225466 A/G 8.45E-5 481 16.67 14.18 14.73 KM Plot
THCA rs82333 chr4:3225389 C/T 8.62E-5 490 14.77 14.63 17 KM Plot
THCA rs82334 chr4:3225371 A/C 0.000186 483 16.67 14.18 15.17 KM Plot
THCA rs832097 chr3:97715521 T/C 0.000158 479 16.6 15.83 12.6 KM Plot
THCA rs848296 chr1:16297331 C/T 1.32E-11 487 15.17 17.93 12.63 KM Plot